A link between feedback outflows and satellite galaxy suppression

We suggest a direct link between the two "missing" baryon problems of contemporary galaxy formation theory: (1) that large galaxies are known to contain too little gas and stars and (2) that too few dwarf satellite galaxies are observed around large galaxies compared with cosmological simulations. The former can be explained by invoking some energetic process -- most likely AGN or star formation feedback -- which expels to infinity a significant fraction of the gas initially present in the proto-galaxy, while the latter problem is usually explained by star formation feedback inside the dwarf or tidal and ram pressure stripping of the gas from the satellite galaxy by its parent. Here we point out that the host galaxy "missing" baryons, if indeed ejected at velocities of hundreds to a thousand km s$^{-1}$, must also affect smaller satellite galaxies by stripping or shocking the gas there. We estimate the fraction of gas removed from the satellites as a function of the satellite galaxy's properties. Applying these results to a Milky Way like dark matter halo, we find that this singular shock ram pressure stripping event may be quite efficient in removing the gas from the satellites provided that they are close enough. We also use the orbital and mass modelling data for eight Galactic dwarf spheroidal (dSph) satellites, and find that it is likely that many of them have been affected by the Galactic outflow. We point out that galactic outflows of the host may also trigger a starburst in the satellite galaxies by over-pressuring their gas discs. This process may be responsible for the formation of the globular clusters observed in some of the Milky Way's dSphs (e.g. the Fornax and Sagittarius dSphs).Comment: appearing in MNRAS; 9 page

The Semantic Automated Discovery and Integration (SADI) Web service Design-Pattern, API and Reference Implementation

Background. 
The complexity and inter-related nature of biological data poses a difficult challenge for data and tool integration. There has been a proliferation of interoperability standards and projects over the past decade, none of which has been widely adopted by the bioinformatics community. Recent attempts have focused on the use of semantics to assist integration, and Semantic Web technologies are being welcomed by this community.

Description. 
SADI – Semantic Automated Discovery and Integration – is a lightweight set of fully standards-compliant Semantic Web service design patterns that simplify the publication of services of the type commonly found in bioinformatics and other scientific domains. Using Semantic Web technologies at every level of the Web services “stack”, SADI services consume and produce instances of OWL Classes following a small number of very straightforward best-practices. In addition, we provide codebases that support these best-practices, and plug-in tools to popular developer and client software that dramatically simplify deployment of services by providers, and the discovery and utilization of those services by their consumers.

Conclusions.
SADI Services are fully compliant with, and utilize only foundational Web standards; are simple to create and maintain for service providers; and can be discovered and utilized in a very intuitive way by biologist end-users. In addition, the SADI design patterns significantly improve the ability of software to automatically discover appropriate services based on user-needs, and automatically chain these into complex analytical workflows. We show that, when resources are exposed through SADI, data compliant with a given ontological model can be automatically gathered, or generated, from these distributed, non-coordinating resources - a behavior we have not observed in any other Semantic system. Finally, we show that, using SADI, data dynamically generated from Web services can be explored in a manner very similar to data housed in static triple-stores, thus facilitating the intersection of Web services and Semantic Web technologies

Dark Matter In Disk Galaxies II: Density Profiles as Constraints on Feedback Scenarios

The disparity between the density profiles of galactic dark matter haloes predicted by dark matter only cosmological simulations and those inferred from rotation curve decomposition, the so-called cusp-core problem, suggests that baryonic physics has an impact on dark matter density in the central regions of galaxies. Feedback from black holes, supernovae and massive stars may each play a role by removing matter from the centre of the galaxy on shorter timescales than the dynamical time of the dark matter halo. Our goal in this paper is to determine constraints on such feedback scenarios based on the observed properties of a set of nearby galaxies. Using a Markov Chain Monte Carlo (MCMC) analysis of galactic rotation curves, via a method developed in a previous paper, we constrain density profiles and an estimated minimum radius for baryon influence, $r_1$, which we couple with a feedback model to give an estimate of the fraction of matter within that radius that must be expelled to produce the presently observed halo profile. We show that in the case of the gas rich dwarf irregular galaxy DDO 154, an outflow from a central source (e.g. a black hole or star forming region) could produce sufficient feedback on the halo without removing the disk gas. We examine the rotation curves of 8 galaxies taken from the THINGS data set and determine constraints on the radial density profiles of their dark matter haloes. For some of the galaxies, both cored haloes and cosmological $\rho \propto r^{-1}$ cusps are excluded. These intermediate central slopes require baryonic feedback to be finely tuned. We also find for galaxies which exhibit extended cores in their haloes (e.g. NGC 925), the use of a split power-law halo profile yields models without the unphysical, sharp features seen in models based on the Einasto profile.Comment: 17 pages, 19 figures Submitted to MNRA

Competitive feedback in galaxy formation

It is now well established that many galaxies have nuclear star clusters (NCs) whose total masses correlate with the velocity dispersion (sigma) of the galaxy spheroid in a very similar way to the well--known supermassive black hole (SMBH) M - sigma relation. Previous theoretical work suggested that both correlations can be explained by a momentum feedback argument. Observations further show that most known NCs have masses < 10^8 Msun, while SMBHs frequently have masses > 10^8 Msun, which remained unexplained in previous work. We suggest here that this changeover reflects a competition between the SMBH and nuclear clusters in the feedback they produce. When one of the massive objects reaches its limiting M-sigma value, it drives the gas away and hence cuts off its own mass and also the mass of the ``competitor''. The latter is then underweight with respect to the expected M-sigma mass (abridged).Comment: To appear in MNRAS Letter

AGN outflows trigger starbursts in gas-rich galaxies

Recent well resolved numerical simulations of AGN feedback have shown that its effects on the host galaxy may be not only negative but also positive. In the late gas poor phase, AGN feedback blows the gas away and terminates star formation. However, in the gas-rich phase(s), AGN outflows trigger star formation by over-compressing cold dense gas and thus provide positive feedback on their hosts. In this paper we study this AGN-triggered starburst effect. We show that star formation rate in the burst increases until the star formation feedback counteracts locally the AGN outflow compression. Globally, this predicts a strong nearly linear statistical correlation between the AGN and starburst bolometric luminosities in disc galaxies, L_* \propto L_{AGN}^{5/6}. The correlation is statistical only because AGN activity may fluctuate on short time scales (as short as tens of years), and because AGN may turn off but its effects on the host may continue to last until the AGN-driven outflow leaves the host, which may be up to 10 times longer than the duration of the AGN activity. The coefficient in front of this relation depends on the clumpiness and morphology of the cold gas in the galaxy. A "maximum starburst" takes place in am azimuthally uniform gas disc, for which we derive an upper limit of L_* \sim 50 times larger than L_{AGN} for typical quasars. For more clumpy and/or compact cold gas distributions, the starburst luminosity decreases. We also suggest that similar AGN-triggerred starbursts are possible in hosts of all geometries, including during galaxy mergers, provided the AGN is activated. Finally, we note that due to the short duration of the AGN activity phase the accelerating influence of AGN on starbursts may be much more common than observations of simultaneous AGN and starbursts would suggest.Comment: 14 pages, 6 figures. Accepted for publication in MNRA